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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
foxf1Forkhead box F1. (380 aa)    
Predicted Functional Partners:
ENSOMEP00000007480
PX domain-containing protein.
    
 0.666
ENSOMEP00000007491
Serum/glucocorticoid regulated kinase family member 3.
    
 0.666
suox
Sulfite oxidase.
     
 0.666
sting1
Transmembrane protein 173.
    
  0.572
ENSOMEP00000003069
Uncharacterized protein.
    
 0.541
LOC112146043
E1A binding protein p300 b.
    
 0.541
ENSOMEP00000004505
CREB binding protein a.
    
 0.541
LOC112153984
E1A binding protein p300 a.
    
 0.541
crebbp
CREB binding protein b.
    
 0.541
ripk4
Receptor-interacting serine-threonine kinase 4.
    
  0.541
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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