STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
faddUncharacterized protein. (188 aa)    
Predicted Functional Partners:
ENSOMEP00000005338
Uncharacterized protein.
   
 0.999
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
   
 0.995
LOC112147424
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.995
ENSOMEP00000009841
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.992
tradd
Tnfrsf1a-associated via death domain.
   
 0.992
cflar
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.988
tnfrsf1a
Tumor necrosis factor receptor superfamily, member 1a.
   
 0.988
LOC112163478
Tumor necrosis factor receptor superfamily, member a.
    
 0.987
ENSOMEP00000022297
Fas ligand (TNF superfamily, member 6); Belongs to the tumor necrosis factor family.
    
 0.976
LOC112155945
Receptor-interacting serine-threonine kinase 3.
   
 0.967
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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