STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112161445ST3 beta-galactoside alpha-2,3-sialyltransferase 7; Belongs to the glycosyltransferase 29 family. (392 aa)    
Predicted Functional Partners:
LOC112159647
Beta-1,4 N-acetylgalactosaminyltransferase.
     
 0.972
st3gal5
ST3 beta-galactoside alpha-2,3-sialyltransferase 5; Belongs to the glycosyltransferase 29 family.
  
  
 
0.927
LOC112152928
Beta-hexosaminidase.
     
 0.926
b4galnt1
Beta-1,4 N-acetylgalactosaminyltransferase.
     
 0.912
hexb
Beta-hexosaminidase.
     
 0.891
LOC112155118
Galactosidase, beta 1-like; Belongs to the glycosyl hydrolase 35 family.
   
 
 0.890
glb1
Beta-galactosidase.
   
 
 0.890
LOC112136811
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6.
     
 0.817
LOC112159165
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5.
     
 0.763
fam149b1
Family with sequence similarity 149 member B1.
     
 0.695
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.