STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaaf1Dynein assembly factor 1, axonemal. (825 aa)    
Predicted Functional Partners:
cunh22orf23
Uncharacterized protein.
   
    0.771
zmynd10
Zinc finger, MYND-type containing 10.
  
 
 0.677
dnai1
Dynein, axonemal, intermediate chain 1, paralog 2.
  
 
 
 0.677
dnali1
Dynein, axonemal, light intermediate chain 1.
  
  
 0.656
ENSOMEP00000010126
Dynein, axonemal, intermediate chain 2b.
    
 
 0.595
rsph9
Radial spoke head 9 homolog.
   
 0.593
LOC112147421
Uncharacterized protein.
    
 
 0.553
ENSOMEP00000032903
Dynein, axonemal, assembly factor 3 like.
      
 0.553
ENSOMEP00000003046
Uncharacterized protein.
  
 
 0.544
lrrc6
Leucine rich repeat containing 6.
  
   
0.541
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.