STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000003096Oxysterol-binding protein; Belongs to the OSBP family. (341 aa)    
Predicted Functional Partners:
LOC112144682
Uncharacterized protein.
    
 0.721
LOC112158866
RAB7a, member RAS oncogene family.
    
 0.721
ENSOMEP00000019239
Uncharacterized protein.
    
 0.721
mospd2
Motile sperm domain containing 2.
    
 
 0.691
LOC112149533
Rab interacting lysosomal protein.
   
 0.596
LOC112148337
Uncharacterized protein.
   
 0.551
RILPL1
Rab interacting lysosomal protein like 1.
   
 0.551
ENSOMEP00000011972
ANK_REP_REGION domain-containing protein.
 
      0.471
ENSOMEP00000010428
MSP domain-containing protein.
    
 
 0.449
vapa
VAMP (vesicle-associated membrane protein)-associated protein A, like.
    
 
 0.449
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.