STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
selenbp1Selenium binding protein 1. (472 aa)    
Predicted Functional Partners:
ENSOMEP00000001766
5-methyltetrahydrofolate-homocysteine methyltransferase.
   
 
 0.900
LOC112160040
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
 0.899
ENSOMEP00000023284
Zgc:172121; Involved in the regulation of homocysteine metabolism.
   
 
 0.898
LOC112148056
Hcy-binding domain-containing protein; Involved in the regulation of homocysteine metabolism.
   
 
 0.896
LOC112155227
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
 0.896
kyat3
Kynurenine aminotransferase 3.
     
 0.894
AHCYL1
Adenosylhomocysteinase like 1; Belongs to the adenosylhomocysteinase family.
     
 0.892
LOC112155657
Adenosylhomocysteinase-like 2; Belongs to the adenosylhomocysteinase family.
     
 0.892
LOC112162826
Betaine-homocysteine methyltransferase; Involved in the regulation of homocysteine metabolism.
   
 
 0.891
LOC112152905
AdoHcyase_NAD domain-containing protein; Belongs to the adenosylhomocysteinase family.
     
 0.889
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.