STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mecomMDS1 and EVI1 complex locus. (1266 aa)    
Predicted Functional Partners:
ENSOMEP00000025532
Mitogen-activated protein kinase.
    
  0.966
rbbp4
Retinoblastoma binding protein 4.
    
  0.947
LOC112152890
Retinoblastoma binding protein 4, like.
    
  0.947
mapk8
Mitogen-activated protein kinase.
    
  0.908
LOC112153234
Mitogen-activated protein kinase.
    
  0.904
LOC112161471
Mitogen-activated protein kinase.
    
  0.900
ENSOMEP00000025045
C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.832
LOC112161475
Uncharacterized protein.
    
 0.832
ctbp2
Uncharacterized protein.
    
 0.832
ctbp1
C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.832
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.