STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112154155Uncharacterized protein. (253 aa)    
Predicted Functional Partners:
PCYT2
Phosphate cytidylyltransferase 2, ethanolamine.
     
 0.904
pcyt2
Phosphate cytidylyltransferase 2, ethanolamine.
     
 0.904
chka
Choline kinase alpha.
     
 0.899
pcyt1b
Phosphate cytidylyltransferase 1, choline, beta a.
     
 0.899
LOC112140235
Phosphate cytidylyltransferase 1, choline, beta b.
     
 0.899
LOC112152336
Choline kinase beta.
     
 0.899
pcyt1a
Phosphate cytidylyltransferase 1, choline, alpha a.
     
 0.899
gpcpd1
Glycerophosphocholine phosphodiesterase 1.
   
 
 0.895
phospho1
Phosphatase, orphan 1.
  
  
 
0.891
LOC112162239
Choline O-acetyltransferase a; Belongs to the carnitine/choline acetyltransferase family.
     
 0.889
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.