STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnajb13DnaJ heat shock protein family (Hsp40) member B13. (320 aa)    
Predicted Functional Partners:
stip1
Stress-induced phosphoprotein 1.
  
 0.897
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
 
 0.885
LOC112142713
Heat shock protein 4a.
 
 0.883
LOC112153161
Heat shock protein 4b.
 
 0.881
LOC112157140
DnaJ heat shock protein family (Hsp40) member A1.
  
0.877
ENSOMEP00000018988
Si:ch211-199o1.2.
 
 0.876
ENSOMEP00000018301
Uncharacterized protein.
 
 0.875
HSPA2
Heat shock protein family A (Hsp70) member 2.
 
 0.875
LOC112143863
Heat shock cognate 70; Belongs to the heat shock protein 70 family.
 
 0.874
LOC112149440
Uncharacterized protein; Belongs to the heat shock protein 70 family.
 
 0.874
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.