STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112161508EABR domain-containing protein. (416 aa)    
Predicted Functional Partners:
ttk
Ttk protein kinase.
   
  
 0.877
aspm
Abnormal spindle microtubule assembly.
   
  
 0.856
nuf2
UF2 component of NDC80 kinetochore complex.
   
  
 0.851
ENSOMEP00000036198
NDC80 kinetochore complex component.
   
  
 0.848
nusap1
Nucleolar and spindle associated protein 1.
   
  
 0.845
ube2c
Ubiquitin-conjugating enzyme E2C; Belongs to the ubiquitin-conjugating enzyme family.
   
  
 0.830
kif11
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.817
ncapg
Non-SMC condensin I complex, subunit G.
   
  
 0.805
pclaf
PCNA clamp associated factor.
   
  
 0.796
LOC112152594
UEV and lactate/malate dehyrogenase domains.
    
 
 0.768
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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