Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSOMEP00000009290 | ENSOMEP00000018021 | ENSOMEP00000009290 | ENSOMEP00000018021 | Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). | Uncharacterized protein. | 0.982 |
ENSOMEP00000009290 | ENSOMEP00000024767 | ENSOMEP00000009290 | ENSOMEP00000024767 | Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). | Uncharacterized protein. | 0.985 |
ENSOMEP00000009290 | ENSOMEP00000027958 | ENSOMEP00000009290 | ENSOMEP00000027958 | Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). | LEO1 homolog, Paf1/RNA polymerase II complex component. | 0.999 |
ENSOMEP00000009290 | ctr9 | ENSOMEP00000009290 | ENSOMEP00000022151 | Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). | CTR9 homolog, Paf1/RNA polymerase II complex component. | 0.999 |
ENSOMEP00000009290 | paf1 | ENSOMEP00000009290 | ENSOMEP00000003975 | Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). | PAF1 homolog, Paf1/RNA polymerase II complex component. | 0.999 |
ENSOMEP00000009290 | polr2c | ENSOMEP00000009290 | ENSOMEP00000033430 | Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). | Polymerase (RNA) II (DNA directed) polypeptide C. | 0.966 |
ENSOMEP00000009290 | rtf1 | ENSOMEP00000009290 | ENSOMEP00000020634 | Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). | RTF1 homolog, Paf1/RNA polymerase II complex component. | 0.998 |
ENSOMEP00000009290 | ssrp1 | ENSOMEP00000009290 | ENSOMEP00000034415 | Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.998 |
ENSOMEP00000009290 | supt16h | ENSOMEP00000009290 | ENSOMEP00000017520 | Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). | SPT16 homolog, facilitates chromatin remodeling subunit. | 0.998 |
ENSOMEP00000009290 | wdr61 | ENSOMEP00000009290 | ENSOMEP00000004068 | Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). | WD repeat domain 61. | 0.999 |
ENSOMEP00000018021 | ENSOMEP00000009290 | ENSOMEP00000018021 | ENSOMEP00000009290 | Uncharacterized protein. | Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). | 0.982 |
ENSOMEP00000018021 | ENSOMEP00000024767 | ENSOMEP00000018021 | ENSOMEP00000024767 | Uncharacterized protein. | Uncharacterized protein. | 0.924 |
ENSOMEP00000018021 | ENSOMEP00000027958 | ENSOMEP00000018021 | ENSOMEP00000027958 | Uncharacterized protein. | LEO1 homolog, Paf1/RNA polymerase II complex component. | 0.997 |
ENSOMEP00000018021 | ctr9 | ENSOMEP00000018021 | ENSOMEP00000022151 | Uncharacterized protein. | CTR9 homolog, Paf1/RNA polymerase II complex component. | 0.983 |
ENSOMEP00000018021 | paf1 | ENSOMEP00000018021 | ENSOMEP00000003975 | Uncharacterized protein. | PAF1 homolog, Paf1/RNA polymerase II complex component. | 0.975 |
ENSOMEP00000018021 | polr2c | ENSOMEP00000018021 | ENSOMEP00000033430 | Uncharacterized protein. | Polymerase (RNA) II (DNA directed) polypeptide C. | 0.998 |
ENSOMEP00000018021 | rtf1 | ENSOMEP00000018021 | ENSOMEP00000020634 | Uncharacterized protein. | RTF1 homolog, Paf1/RNA polymerase II complex component. | 0.989 |
ENSOMEP00000018021 | ssrp1 | ENSOMEP00000018021 | ENSOMEP00000034415 | Uncharacterized protein. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.992 |
ENSOMEP00000018021 | supt16h | ENSOMEP00000018021 | ENSOMEP00000017520 | Uncharacterized protein. | SPT16 homolog, facilitates chromatin remodeling subunit. | 0.994 |
ENSOMEP00000018021 | wdr61 | ENSOMEP00000018021 | ENSOMEP00000004068 | Uncharacterized protein. | WD repeat domain 61. | 0.944 |
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