STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112152932Solute carrier family 25 member 44a; Belongs to the mitochondrial carrier (TC 2.A.29) family. (319 aa)    
Predicted Functional Partners:
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
     
 0.714
LOC112159005
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3.
   
 
  0.497
b4galt4
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4.
   
 
  0.497
LOC112136663
Si:dkey-199f5.8.
   
 
  0.497
ENSOMEP00000027466
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2.
   
 
  0.497
b4galt1
DP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, like.
   
 
  0.497
impdh2
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
    
   0.495
LOC112152856
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
    
   0.495
IMPDH
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
    
   0.495
LOC112136811
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6.
   
 
  0.465
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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