STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptgfrProstaglandin F receptor (FP); Belongs to the G-protein coupled receptor 1 family. (354 aa)    
Predicted Functional Partners:
LOC112163038
Guanine nucleotide binding protein (G protein), alpha 14.
    
  0.919
LOC112148434
Uncharacterized protein.
    
  0.917
LOC112150647
Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.
    
  0.917
LOC112148947
Guanine nucleotide binding protein (G protein), alpha 14a.
    
  0.917
LOC112163036
Uncharacterized protein.
    
  0.911
LOC112150368
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
  0.906
LOC112143250
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
  0.895
LOC112147946
Arginine vasopressin; Belongs to the vasopressin/oxytocin family.
    
 0.803
LOC112148831
Uncharacterized protein; Belongs to the vasopressin/oxytocin family.
    
 0.803
f2
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
    
  0.789
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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