STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dimt1rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (306 aa)    
Predicted Functional Partners:
tsr1
TSR1 ribosome maturation factor.
   
 
 0.999
bysl
Bystin-like.
   
 
 0.999
ENSOMEP00000034192
PWP2 small subunit processome component.
   
 
 0.999
imp4
IMP U3 small nucleolar ribonucleoprotein 4.
   
   0.996
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.994
ltv1
LTV1 ribosome biogenesis factor.
   
 
 0.993
riok2
RIO kinase 2 (yeast).
   
 
 0.992
noc4l
Nucleolar complex associated 4 homolog.
   
   0.989
ENSOMEP00000008748
WD repeat domain 43.
   
   0.988
imp3
IMP U3 small nucleolar ribonucleoprotein 3.
  
 
 0.988
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.