STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112161477Discs, large homolog 5a (Drosophila); Belongs to the MAGUK family. (2016 aa)    
Predicted Functional Partners:
LOC112159975
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.882
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.882
ENSOMEP00000026519
Uncharacterized protein.
   
 0.849
ENSOMEP00000026529
Uncharacterized protein.
   
 0.849
ENSOMEP00000012011
LLGL scribble cell polarity complex component 2.
    
 0.819
LLGL1
LLGL scribble cell polarity complex component 1.
    
 0.819
ENSOMEP00000000687
Uncharacterized protein.
    
0.774
ENSOMEP00000001099
Leucine rich repeat containing 1.
    
 0.774
ENSOMEP00000022166
Scribble planar cell polarity protein.
    
 0.774
lrrc7
Leucine rich repeat containing 7.
    
 0.758
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.