STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000004422Solute carrier family 45 member 2. (404 aa)    
Predicted Functional Partners:
foxd1
Forkhead box D1.
    
 
 0.609
TYR
Tyrosinase.
   
  
 0.608
LOC112148914
Tetraspanin.
      
 0.597
LOC112149555
Somatolactin alpha.
      
 0.575
ENSOMEP00000035372
Premelanosome protein a.
   
  
 0.559
ENSOMEP00000008936
Solute carrier family 24 member 5; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.548
LOC112152637
Forkhead box L1.
    
 
 0.547
oca2
Oculocutaneous albinism II.
      
 0.537
psmb2
Proteasome subunit beta.
   
  
 0.516
LOC112145176
Melanocyte inducing transcription factor a.
   
  
 0.504
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.