STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000004459Potassium large conductance calcium-activated channel, subfamily M, alpha member 1a. (1077 aa)    
Predicted Functional Partners:
KCNMB4
Potassium calcium-activated channel subfamily M regulatory beta subunit 4.
    
 0.942
LOC112147433
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.833
LOC112147413
Potassium large conductance calcium-activated channel, subfamily M, beta member 2.
    
 0.798
ENSOMEP00000005349
Si:ch211-38m6.7.
     
 0.798
ENSOMEP00000016405
Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4.
     
 0.795
prkaca
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.747
LOC112146515
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
    
 0.747
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.747
LOC112150616
Si:ch211-247n2.1.
    
 0.719
prkg1
cGMP-dependent protein kinase.
   
 
 0.677
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.