STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RS1Retinoschisin 1. (252 aa)    
Predicted Functional Partners:
ENSOMEP00000009786
Aminoadipate-semialdehyde dehydrogenase.
     
 0.696
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
 
 0.690
pros1
Protein S.
   
  0.680
ENSOMEP00000005403
ATPase copper transporting alpha.
  
 
 0.656
LOC112153603
ATPase copper transporting alpha.
  
 
 0.656
ENSOMEP00000018948
Uncharacterized protein.
  
 
 0.656
ENSOMEP00000018978
Uncharacterized protein.
  
 
 0.656
ENSOMEP00000018421
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.653
slc40a1
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.653
FXN
Frataxin.
     
 0.652
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
Server load: low (24%) [HD]