STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000005065Glyco_hydro_38C domain-containing protein. (337 aa)    
Predicted Functional Partners:
man2b2
Alpha-mannosidase.
     
 0.899
ENSOMEP00000033343
Alpha-mannosidase.
     
 0.899
ENSOMEP00000006614
Uncharacterized protein.
   
 
 0.708
engase
Endo-beta-N-acetylglucosaminidase.
  
  
 0.654
man2a2
Alpha-mannosidase.
     
 0.632
LOC112162978
Alpha-mannosidase.
     
 0.632
mogs
Mannosyl-oligosaccharide glucosidase.
   
  
 0.618
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 
 0.554
gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
  
  
 0.532
xrn1
5'-3' exoribonuclease 1.
    
   0.531
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.