STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cttnbp2Cortactin binding protein 2. (1689 aa)    
Predicted Functional Partners:
ift81
Intraflagellar transport 81 homolog.
    
 0.636
ift22
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 0.611
ENSOMEP00000027205
Uncharacterized protein.
   
 0.606
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.600
ENSOMEP00000012692
Fleer.
    
 0.594
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.590
ENSOMEP00000000292
Baculoviral IAP repeat containing 6.
   
  0.584
ENSOMEP00000033614
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
  0.584
ENSOMEP00000010571
Intraflagellar transport 80 homolog (Chlamydomonas).
    
 0.576
mars1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.554
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.