lsm12 protein (Oryzias melastigma) - STRING interaction network

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Predicted Interactions

gene neighborhood

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gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

lsm12

LSM12 homolog b. (214 aa)

Predicted Functional Partners:

ENSOMEP00000018381

0.987

LOC112153967

0.987

ddx6

0.920

ENSOMEP00000020451

0.920

LOC112147455

0.873

trnau1ap

0.873

ddx20

0.752

ENSOMEP00000025110

0.737

naa38

0.656

rtraf

0.654

Your Current Organism:

Oryzias melastigma

NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSOMEP00000018381	ENSOMEP00000020451	ENSOMEP00000018381	ENSOMEP00000020451	Ataxin 2.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.897
ENSOMEP00000018381	ENSOMEP00000025110	ENSOMEP00000018381	ENSOMEP00000025110	Ataxin 2.	Nuclear FMR1 interacting protein 2.	0.715
ENSOMEP00000018381	LOC112147455	ENSOMEP00000018381	ENSOMEP00000014985	Ataxin 2.	tRNA selenocysteine 1 associated protein 1b.	0.823
ENSOMEP00000018381	LOC112153967	ENSOMEP00000018381	ENSOMEP00000034449	Ataxin 2.	LsmAD domain-containing protein.	0.844
ENSOMEP00000018381	ddx20	ENSOMEP00000018381	ENSOMEP00000012280	Ataxin 2.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.	0.430
ENSOMEP00000018381	ddx6	ENSOMEP00000018381	ENSOMEP00000000439	Ataxin 2.	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.	0.897
ENSOMEP00000018381	lsm12	ENSOMEP00000018381	ENSOMEP00000005196	Ataxin 2.	LSM12 homolog b.	0.987
ENSOMEP00000018381	naa38	ENSOMEP00000018381	ENSOMEP00000012342	Ataxin 2.	N(alpha)-acetyltransferase 38, NatC auxiliary subunit.	0.826
ENSOMEP00000018381	rtraf	ENSOMEP00000018381	ENSOMEP00000002359	Ataxin 2.	RNA transcription, translation and transport factor.	0.481
ENSOMEP00000018381	trnau1ap	ENSOMEP00000018381	ENSOMEP00000026189	Ataxin 2.	tRNA selenocysteine 1 associated protein 1a.	0.823
ENSOMEP00000020451	ENSOMEP00000018381	ENSOMEP00000020451	ENSOMEP00000018381	Uncharacterized protein; Belongs to the DEAD box helicase family.	Ataxin 2.	0.897
ENSOMEP00000020451	ENSOMEP00000025110	ENSOMEP00000020451	ENSOMEP00000025110	Uncharacterized protein; Belongs to the DEAD box helicase family.	Nuclear FMR1 interacting protein 2.	0.753
ENSOMEP00000020451	LOC112147455	ENSOMEP00000020451	ENSOMEP00000014985	Uncharacterized protein; Belongs to the DEAD box helicase family.	tRNA selenocysteine 1 associated protein 1b.	0.506
ENSOMEP00000020451	LOC112153967	ENSOMEP00000020451	ENSOMEP00000034449	Uncharacterized protein; Belongs to the DEAD box helicase family.	LsmAD domain-containing protein.	0.884
ENSOMEP00000020451	ddx6	ENSOMEP00000020451	ENSOMEP00000000439	Uncharacterized protein; Belongs to the DEAD box helicase family.	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.	0.896
ENSOMEP00000020451	lsm12	ENSOMEP00000020451	ENSOMEP00000005196	Uncharacterized protein; Belongs to the DEAD box helicase family.	LSM12 homolog b.	0.920
ENSOMEP00000020451	naa38	ENSOMEP00000020451	ENSOMEP00000012342	Uncharacterized protein; Belongs to the DEAD box helicase family.	N(alpha)-acetyltransferase 38, NatC auxiliary subunit.	0.577
ENSOMEP00000020451	rtraf	ENSOMEP00000020451	ENSOMEP00000002359	Uncharacterized protein; Belongs to the DEAD box helicase family.	RNA transcription, translation and transport factor.	0.493
ENSOMEP00000020451	trnau1ap	ENSOMEP00000020451	ENSOMEP00000026189	Uncharacterized protein; Belongs to the DEAD box helicase family.	tRNA selenocysteine 1 associated protein 1a.	0.506
ENSOMEP00000025110	ENSOMEP00000018381	ENSOMEP00000025110	ENSOMEP00000018381	Nuclear FMR1 interacting protein 2.	Ataxin 2.	0.715