STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rgl1Ral guanine nucleotide dissociation stimulator-like 1. (814 aa)    
Predicted Functional Partners:
LOC112151583
V-ral simian leukemia viral oncogene homolog Aa (ras related).
   
 0.849
LOC112154909
Uncharacterized protein.
   
 0.849
LOC112156829
Uncharacterized protein.
   
 0.849
KRAS
V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.
   
 0.838
hras
HRas proto-oncogene, GTPase a.
   
 0.838
CSDE1
Cold shock domain containing E1, RNA-binding.
   
 0.838
LOC112146394
Zgc:55558.
   
 0.838
LOC112158849
RAP1A, member of RAS oncogene family a.
    
 0.829
LOC112144686
RAP1A, member of RAS oncogene family b.
    
 0.829
LOC112155385
Uncharacterized protein.
    
 0.829
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.