STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
washc1WAS protein family homolog 1. (474 aa)    
Predicted Functional Partners:
washc3
WASH complex subunit 3.
    
 0.985
washc5
WASH complex subunit 5.
   
 0.963
washc2c
CAP-ZIP_m domain-containing protein.
    
 
 0.939
washc4
WASH complex subunit 4.
    
 0.918
LOC112150000
Zgc:153184.
    
 
 0.825
LOC112138640
CAP-ZIP_m domain-containing protein.
    
 
 0.825
LOC112152236
Heat shock factor binding protein 1.
     
 0.770
LOC112152236-2
Heat shock factor-binding protein 1-like.
     
 0.770
ENSOMEP00000034421
Heat shock factor binding protein 1.
     
 0.770
vps35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.699
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.