STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000005809Ash1 (absent, small, or homeotic)-like (Drosophila). (2799 aa)    
Predicted Functional Partners:
ENSOMEP00000020599
SET domain containing 2, histone lysine methyltransferase.
   
 
0.951
ENSOMEP00000003717
Lysine (K)-specific methyltransferase 2E.
   
0.907
plod2
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2.
    
  0.899
LOC112141494
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3.
    
  0.899
plod1
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a.
    
  0.893
ENSOMEP00000003686
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
   
 0.888
camkmt
Calmodulin-lysine N-methyltransferase.
     
 0.875
LOC112152935
Mortality factor 4 like 1.
   
 
 0.874
morf4l1
MRG domain-containing protein.
   
 
 0.874
USP34
Ubiquitin specific peptidase 34; Belongs to the peptidase C19 family.
   
 
 0.863
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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