STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
auhAU RNA binding protein/enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (323 aa)    
Predicted Functional Partners:
hmgcl
3-hydroxy-3-methylglutaryl-CoA lyase.
  
 
 0.963
mccc2
Methylcrotonoyl-CoA carboxylase 2 (beta).
  
 
 0.953
ENSOMEP00000016606
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
  
 
 0.951
mccc1
Methylcrotonoyl-CoA carboxylase 1 (alpha).
  
 0.951
ENSOMEP00000022446
3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1.
  
 
 0.946
hadh
Hydroxyacyl-CoA dehydrogenase.
 0.938
LOC112150940
Si:ch211-198n5.11.
  
 
 0.931
ENSOMEP00000027260
Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.908
LOC112150106
Sterol carrier protein 2b.
  
 0.896
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.896
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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