STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000006083Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b. (600 aa)    
Predicted Functional Partners:
LOC112158849
RAP1A, member of RAS oncogene family a.
    
 0.790
LOC112144686
RAP1A, member of RAS oncogene family b.
    
 0.790
LOC112155385
Uncharacterized protein.
    
 0.790
grb2
Growth factor receptor-bound protein 2b.
    
 0.784
tlnrd1
Talin rod domain containing 1.
    
 0.729
ENSOMEP00000016584
FERM domain-containing protein.
    
 0.729
ENSOMEP00000029058
Talin 2a.
    
 0.729
ENSOMEP00000032625
Talin 1.
    
 0.729
ENSOMEP00000035599
Talin 2b.
    
 0.729
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.727
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.