STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112141477Profilin; Belongs to the profilin family. (142 aa)    
Predicted Functional Partners:
DIAPH1
Diaphanous related formin 1.
    
 0.983
diaph2
Diaphanous-related formin 2.
    
 0.933
actb
Actin beta.
   
 0.839
LOC112138175
Uncharacterized protein.
   
 0.839
LOC112138173
Uncharacterized protein.
   
 0.839
LOC112137204
Actin, beta 1.
   
 0.839
LOC112157884
Dishevelled associated activator of morphogenesis 1b.
    
 0.826
cap2
Adenylyl cyclase-associated protein; Belongs to the CAP family.
   
 0.807
cap1
Adenylyl cyclase-associated protein; Belongs to the CAP family.
   
 0.807
ENSOMEP00000021673
Drf_GBD domain-containing protein.
    
 0.778
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.