STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000006230Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (333 aa)    
Predicted Functional Partners:
LOC112143176
Uncharacterized protein.
  
 
0.537
LOC112162515
Si:ch211-39a7.1.
   
 
0.489
LOC112137508
Uncharacterized protein.
   
 
0.489
LOC112153653
Si:ch73-380n15.2.
   
 
0.489
ENSOMEP00000026083
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 
0.489
ENSOMEP00000034351
Uncharacterized protein.
   
 
0.489
ENSOMEP00000008618
Uncharacterized protein.
  
     0.441
RIC3
RIC3 acetylcholine receptor chaperone.
  
 
   0.400
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.