close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bahd1Bromo adjacent homology domain containing 1. (816 aa)    
Predicted Functional Partners:
ENSOMEP00000001785
Pyridoxal-dependent decarboxylase domain containing 1.
      
 0.597
ENSOMEP00000002454
Prolyl 4-hydroxylase, alpha polypeptide III.
      
 0.597
ENSOMEP00000011623
PPP1R35_C domain-containing protein.
      
 0.597
ENSOMEP00000031576
Fibronectin type III domain containing 3Ba.
      
 0.595
LOC112143180
Iroquois homeobox 4a.
    
 
 0.568
mier1
Mesoderm induction early response 1b, transcriptional regulator.
    
 
 0.556
mier3
Mesoderm induction early response 1, family member 3 b.
    
 
 0.556
TMEM43
Uncharacterized protein.
      
 0.501
fbxl5
F-box and leucine-rich repeat protein 5.
      
 0.501
ENSOMEP00000032773
Thymocyte selection associated family member 2.
      
 0.501
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.