STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112137838Si:ch211-152p11.4. (322 aa)    
Predicted Functional Partners:
gsk3b
Glycogen synthase kinase 3 beta, genome duplicate b; Belongs to the protein kinase superfamily.
    
 0.691
LOC112143678
Glycogen synthase kinase 3 alpha b; Belongs to the protein kinase superfamily.
    
 0.691
ENSOMEP00000032192
Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily.
    
 0.691
ENSOMEP00000030912
APC regulator of WNT signaling pathway 2.
    
 0.683
ENSOMEP00000034168
APC_N_CC domain-containing protein.
    
 0.683
csnk1a1
Casein kinase 1, alpha 1; Belongs to the protein kinase superfamily.
    
 0.647
ENSOMEP00000015352
DIX domain-containing protein.
    
 0.620
ENSOMEP00000016565
Dishevelled segment polarity protein 3a.
    
 0.620
dvl1
Dishevelled segment polarity protein 1a.
    
 0.620
dvl2
Dishevelled segment polarity protein 2.
    
 0.620
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.