STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112137509Cholinergic receptor, nicotinic, beta polypeptide 3a. (470 aa)    
Predicted Functional Partners:
ENSOMEP00000000605
Uncharacterized protein.
  
0.789
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
  
0.789
chrna2
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
  
0.764
LOC112158634
Cholinergic receptor, nicotinic, alpha 4b.
  
0.762
LOC112160961
Cholinergic receptor, nicotinic, beta 4 (neuronal).
  
0.717
LOC112153797
Cholinergic receptor nicotinic alpha 6 subunit.
  
0.653
LOC112137651
Uncharacterized protein.
  
0.652
ENSOMEP00000002550
Cholinergic receptor, nicotinic, beta 1 (muscle) like.
  
0.642
LOC112156082
Cholinergic receptor, nicotinic, beta 1 (muscle).
  
0.642
LOC112139024
Cholinergic receptor, nicotinic, epsilon.
  
0.638
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.