STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000007049PIPK domain-containing protein. (520 aa)    
Predicted Functional Partners:
ENSOMEP00000012527
SEC61 translocon gamma subunit.
   
 0.792
plch1
Phosphoinositide phospholipase C.
   
 0.757
LOC112140427
Phosphoinositide phospholipase C.
   
 0.757
LOC112151413
Phosphoinositide phospholipase C.
   
 0.757
LOC112147284
Phosphoinositide phospholipase C.
   
 0.757
LOC112146796
Phosphoinositide phospholipase C.
   
 0.757
ENSOMEP00000035792
Phospholipase C, epsilon 1.
   
 0.757
ENSOMEP00000012755
Synaptojanin 1.
    
 0.755
LOC112159207
Ras homolog gene family, member Aa.
    
 0.743
LOC112139479
SAC1 like phosphatidylinositide phosphatase b.
    
 0.742
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.