STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
blmhBleomycin hydrolase; Belongs to the peptidase C1 family. (452 aa)    
Predicted Functional Partners:
ENSOMEP00000023649
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
    
 
 0.874
nudt13
Nudix (nucleoside diphosphate linked moiety X)-type motif 13.
    
   0.695
ENSOMEP00000005108
Keratocan.
   
   0.690
palb2
PALB2_WD40 domain-containing protein.
      
 0.597
tpp2
Tripeptidyl peptidase 2.
   
 
 0.573
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
      
 0.538
tsfm
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
     
 0.537
edf1
Endothelial differentiation-related factor 1.
      
 0.505
ENSOMEP00000013212
SH3 domain binding glutamate-rich protein like.
      
 0.491
mthfr
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
      
 0.483
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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