STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc22a7Solute carrier family 22 member 7a. (548 aa)    
Predicted Functional Partners:
ENSOMEP00000005257
Phospholipase A2.
    
 0.754
ints9
Integrator complex subunit 9.
    
 0.664
ints1
Integrator complex subunit 1.
    
 0.657
ints11
Integrator complex subunit 11.
    
 0.653
ints4
Integrator complex subunit 4.
    
 0.642
eef1g
Eukaryotic translation elongation factor 1 gamma.
    
 0.637
ints3
Integrator complex subunit 3.
    
 0.636
ints7
Integrator complex subunit 7.
    
 0.634
ints13
Integrator complex subunit 13.
    
 0.633
ints10
Integrator complex subunit 10.
    
 0.623
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.