STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000007610Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (821 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
   
 0.996
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
   
 0.832
ENSOMEP00000034855
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.
    
 0.802
ENSOMEP00000009363
Uncharacterized protein.
    
 
 0.801
ENSOMEP00000009387
Uncharacterized protein.
    
 
 0.801
ENSOMEP00000015987
Uncharacterized protein.
    
 
 0.801
ENSOMEP00000016023
Uncharacterized protein.
    
 
 0.801
ENSOMEP00000027877
Uncharacterized protein.
    
 
 0.801
ENSOMEP00000032288
Uncharacterized protein.
    
 
 0.801
pink1
PTEN induced kinase 1.
    
 0.788
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.