STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
efhc2EF-hand domain (C-terminal) containing 2. (734 aa)    
Predicted Functional Partners:
pacrg
PARK2 co-regulated.
  
 
 0.961
ENSOMEP00000014803
WD_REPEATS_REGION domain-containing protein.
    
 
 0.942
ENSOMEP00000014825
Uncharacterized protein.
    
 
 0.942
tekt3
Tektin 3.
   
 
 0.909
cfap52
Cilia and flagella associated protein 52.
   
 
 0.908
mns1
Meiosis-specific nuclear structural 1.
  
 
 
 0.907
cfap20
Cilia and flagella associated protein 20.
    
 
 0.904
efhc1
EF-hand domain (C-terminal) containing 1.
  
  
0.903
efhb
Uncharacterized protein.
   
   0.902
spag8
Sperm associated antigen 8.
   
   0.899
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.