STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000007787Dpy-30 histone methyltransferase complex regulatory subunit. (103 aa)    
Predicted Functional Partners:
rbbp5
Retinoblastoma binding protein 5.
    
 0.999
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.999
wdr5
WD repeat domain 5.
   
 0.980
LOC112158908
Uncharacterized protein.
    
 0.952
cxxc1
CXXC finger protein 1b.
    
 0.952
setd1b
SET domain containing 1B, histone lysine methyltransferase a.
    
 0.948
ENSOMEP00000011877
RRM domain-containing protein.
    
 0.948
LOC112146211
SET domain containing 1A, histone lysine methyltransferase.
    
 0.948
ENSOMEP00000002833
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
   0.947
ENSOMEP00000020966
Ribosomal protein S27a.
    
   0.944
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.