STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112150654PLAT domain-containing protein. (510 aa)    
Predicted Functional Partners:
plpp5
Phospholipid phosphatase 5.
    
  0.912
dgkz
Diacylglycerol kinase.
   
 
 0.910
plpp4
Phospholipid phosphatase 4.
    
  0.904
CEL
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
    
  0.902
CEL-2
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
    
  0.899
LOC112142411
AMP-binding domain-containing protein.
    
  0.898
LOC112148245
Acyl-CoA synthetase long chain family member 2.
    
  0.898
acsl4
Acyl-CoA synthetase long chain family member 4a.
    
  0.898
acsl3
Uncharacterized protein.
    
  0.898
acsbg2
Acyl-CoA synthetase bubblegum family member 2.
    
 0.898
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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