STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000008143Peptidylprolyl isomerase (cyclophilin)-like 2. (523 aa)    
Predicted Functional Partners:
cwc22
CWC22 spliceosome associated protein homolog.
   
 0.995
mtrex
Mtr4 exosome RNA helicase.
   
 0.988
ppil1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 
 
0.983
cdc40
Cell division cycle 40 homolog (S. cerevisiae).
   
 0.954
ENSOMEP00000024541
BUD31 homolog.
    
 0.953
snw1
SNW domain containing 1.
    
 0.951
ENSOMEP00000012648
Serine/arginine repetitive matrix 1.
    
 0.944
dhx16
DEAH (Asp-Glu-Ala-His) box polypeptide 16.
  
 0.939
cwc27
CWC27 spliceosome associated cyclophilin.
  
0.929
rnf113a
Ring finger protein 113A.
   
 0.922
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.