STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112145400Rho guanine nucleotide exchange factor (GEF) 25b. (678 aa)    
Predicted Functional Partners:
ENSOMEP00000012235
Uncharacterized protein.
 
 
 
  0.826
ENSOMEP00000029319
Uncharacterized protein.
 
   
  0.823
ENSOMEP00000005257
Phospholipase A2.
   
 
  0.819
LOC112148434
Uncharacterized protein.
    
 0.767
LOC112143250
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
 0.767
LOC112148947
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.767
LOC112150368
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
 0.767
LOC112150647
Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.
    
 0.766
rxfp2
Relaxin family peptide receptor 2a.
   
 
  0.714
ENSOMEP00000020844
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
 
  0.714
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.