STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000008697NK-lysin tandem duplicate 3. (170 aa)    
Predicted Functional Partners:
LOC112146979
Uncharacterized protein.
   
  
 0.889
LOC112141416
Uncharacterized protein.
   
  
 0.889
ENSOMEP00000024195
Uncharacterized protein.
  
  
 0.832
galc
Galactosylceramidase b.
    
 
 0.758
LOC112145370
Uncharacterized protein.
   
  
 0.736
ENSOMEP00000005755
Transmembrane protein 130.
   
 0.693
gba
Glucosylceramidase.
   
 0.693
LOC112143674
Ig-like domain-containing protein.
  
   
 0.605
ENSOMEP00000022297
Fas ligand (TNF superfamily, member 6); Belongs to the tumor necrosis factor family.
   
  
 0.605
ENSOMEP00000009994
NMU domain-containing protein.
     
 0.576
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.