STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000008785Uncharacterized protein. (149 aa)    
Predicted Functional Partners:
fancm
Uncharacterized protein.
    
 0.894
ENSOMEP00000005809
Ash1 (absent, small, or homeotic)-like (Drosophila).
   
 0.753
ash1l
Uncharacterized protein.
   
 0.753
setdb1
SET domain bifurcated histone lysine methyltransferase 1b.
   
 0.683
smyd4
SET and MYND domain containing 4.
   
 0.676
kmt5a
Lysine methyltransferase 5Aa.
   
 0.675
LOC112148771
Lysine methyltransferase 5Ab.
   
 0.675
h6pd
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
   
 
 0.658
ENSOMEP00000003686
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
     
 0.647
ENSOMEP00000020599
SET domain containing 2, histone lysine methyltransferase.
   
 
 0.576
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.