Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSOMEP00000007110 | ENSOMEP00000009044 | ENSOMEP00000007110 | ENSOMEP00000009044 | REST corepressor 3. | RE1-silencing transcription factor. | 0.870 |
ENSOMEP00000007110 | HDAC1 | ENSOMEP00000007110 | ENSOMEP00000012871 | REST corepressor 3. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.762 |
ENSOMEP00000007110 | HDAC2 | ENSOMEP00000007110 | ENSOMEP00000002545 | REST corepressor 3. | Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.762 |
ENSOMEP00000007110 | LOC112160390 | ENSOMEP00000007110 | ENSOMEP00000005342 | REST corepressor 3. | SIN3 transcription regulator family member Ab. | 0.684 |
ENSOMEP00000007110 | kdm1a | ENSOMEP00000007110 | ENSOMEP00000030731 | REST corepressor 3. | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | 0.974 |
ENSOMEP00000007110 | sin3a | ENSOMEP00000007110 | ENSOMEP00000024376 | REST corepressor 3. | SIN3 transcription regulator family member Aa. | 0.684 |
ENSOMEP00000007110 | sin3b | ENSOMEP00000007110 | ENSOMEP00000010309 | REST corepressor 3. | SIN3 transcription regulator family member B. | 0.684 |
ENSOMEP00000007602 | ENSOMEP00000009044 | ENSOMEP00000007602 | ENSOMEP00000009044 | REST corepressor 2. | RE1-silencing transcription factor. | 0.870 |
ENSOMEP00000007602 | HDAC1 | ENSOMEP00000007602 | ENSOMEP00000012871 | REST corepressor 2. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.762 |
ENSOMEP00000007602 | HDAC2 | ENSOMEP00000007602 | ENSOMEP00000002545 | REST corepressor 2. | Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.762 |
ENSOMEP00000007602 | LOC112160390 | ENSOMEP00000007602 | ENSOMEP00000005342 | REST corepressor 2. | SIN3 transcription regulator family member Ab. | 0.684 |
ENSOMEP00000007602 | kdm1a | ENSOMEP00000007602 | ENSOMEP00000030731 | REST corepressor 2. | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | 0.974 |
ENSOMEP00000007602 | sin3a | ENSOMEP00000007602 | ENSOMEP00000024376 | REST corepressor 2. | SIN3 transcription regulator family member Aa. | 0.684 |
ENSOMEP00000007602 | sin3b | ENSOMEP00000007602 | ENSOMEP00000010309 | REST corepressor 2. | SIN3 transcription regulator family member B. | 0.684 |
ENSOMEP00000009044 | ENSOMEP00000007110 | ENSOMEP00000009044 | ENSOMEP00000007110 | RE1-silencing transcription factor. | REST corepressor 3. | 0.870 |
ENSOMEP00000009044 | ENSOMEP00000007602 | ENSOMEP00000009044 | ENSOMEP00000007602 | RE1-silencing transcription factor. | REST corepressor 2. | 0.870 |
ENSOMEP00000009044 | ENSOMEP00000020141 | ENSOMEP00000009044 | ENSOMEP00000020141 | RE1-silencing transcription factor. | Uncharacterized protein. | 0.905 |
ENSOMEP00000009044 | HDAC1 | ENSOMEP00000009044 | ENSOMEP00000012871 | RE1-silencing transcription factor. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.791 |
ENSOMEP00000009044 | HDAC2 | ENSOMEP00000009044 | ENSOMEP00000002545 | RE1-silencing transcription factor. | Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.791 |
ENSOMEP00000009044 | LOC112160390 | ENSOMEP00000009044 | ENSOMEP00000005342 | RE1-silencing transcription factor. | SIN3 transcription regulator family member Ab. | 0.929 |
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