STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112145207Inter-alpha-trypsin inhibitor heavy chain 1. (910 aa)    
Predicted Functional Partners:
coq3
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
   
 0.889
ppox
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
 
 0.802
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.800
sord
Sorbitol dehydrogenase.
  
 
 0.781
itih5
Inter-alpha-trypsin inhibitor heavy chain 5.
 
 
0.776
gmps
Guanine monophosphate synthase.
    
  0.747
ephx2
Epoxide hydrolase 2, cytoplasmic.
  
 
 0.702
NT5E
5'-nucleotidase, ecto (CD73); Belongs to the 5'-nucleotidase family.
    
 0.697
NT5E-2
5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family.
    
 0.697
nanp
N-acetylneuraminic acid phosphatase.
    
  0.676
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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