STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112139881Vang-like protein. (526 aa)    
Predicted Functional Partners:
prickle2
Prickle homolog 2b.
    
 0.970
PRICKLE1
Prickle homolog 1a.
    
 0.970
LOC112158427
Prickle homolog 1b.
    
 0.970
ENSOMEP00000008642
Prickle homolog 2a.
    
 0.969
dvl2
Dishevelled segment polarity protein 2.
    
 0.966
dvl1
Dishevelled segment polarity protein 1a.
    
 0.959
prickle3
Prickle homolog 3.
    
 0.954
ENSOMEP00000015352
DIX domain-containing protein.
    
 0.951
ENSOMEP00000016565
Dishevelled segment polarity protein 3a.
    
 0.872
LOC112155542
Vang-like protein.
  
  
 
0.871
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.