STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
qsox1Sulfhydryl oxidase. (796 aa)    
Predicted Functional Partners:
pdia6
Protein disulfide isomerase family A, member 6; Belongs to the protein disulfide isomerase family.
   
 
0.664
txndc5
Thioredoxin domain containing 5; Belongs to the protein disulfide isomerase family.
     
0.663
fam20a
FAM20A golgi associated secretory pathway pseudokinase.
     
 0.646
fam20b
FAM20B glycosaminoglycan xylosylkinase.
     
 0.625
ero1b
Endoplasmic reticulum oxidoreductase beta.
     
 0.621
LOC112140184
Endoplasmic reticulum oxidoreductase alpha.
     
 0.621
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
   
 
0.500
aplp2
Amyloid beta (A4) precursor-like protein 2.
     
 0.497
erp27
Uncharacterized protein.
     
 0.463
ENSOMEP00000023339
Thioredoxin domain containing 16.
     
 0.463
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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