STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdc42se2CDC42 small effector 2. (76 aa)    
Predicted Functional Partners:
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
  
 0.887
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
  
 0.811
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
  
 0.768
hyou1
Hypoxia up-regulated 1.
  
 0.764
CDC42
Cell division cycle 42.
    
 0.761
LOC112144774
Cell division cycle 42.
    
 0.761
dnajc3
DnaJ (Hsp40) homolog, subfamily C, member 3a.
   
 0.754
LOC112156076
DnaJ (Hsp40) homolog, subfamily C, member 3b.
   
 0.754
grpel1
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 
 0.739
hspa4l
Heat shock protein 4 like.
  
 0.727
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.