STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000011447Uncharacterized protein. (213 aa)    
Predicted Functional Partners:
ENSOMEP00000006794
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.854
ENSOMEP00000027958
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.852
POLR2E
RNA polymerase II subunit E.
    
 0.845
polr2i
Polymerase (RNA) II (DNA directed) polypeptide I.
    
 0.845
ENSOMEP00000011934
Uncharacterized protein.
    
 0.845
polr2g
Polymerase (RNA) II (DNA directed) polypeptide G-like.
   
 0.845
polr2l
Polymerase (RNA) II (DNA directed) polypeptide L.
    
 0.845
ENSOMEP00000025354
Polymerase (RNA) II (DNA directed) polypeptide F.
    
 0.845
polr2d
Polymerase (RNA) II (DNA directed) polypeptide D.
    
 0.845
polr2c
Polymerase (RNA) II (DNA directed) polypeptide C.
    
 0.845
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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