STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOMEP00000012263Uncharacterized protein. (341 aa)    
Predicted Functional Partners:
LOC112145869
GRB2 related adaptor protein 2a.
   
 0.756
fyb1
Uncharacterized protein.
   
 0.726
grb2
Growth factor receptor-bound protein 2b.
   
 0.691
ENSOMEP00000008609
FH2 domain-containing protein.
    
 0.684
FMN1
Formin 1.
    
 0.684
ENSOMEP00000029915
FH2 domain-containing protein.
    
 0.684
ENSOMEP00000033157
Uncharacterized protein.
    
 0.684
gak
Cyclin G associated kinase.
   
 0.629
nck2
Cytoplasmic protein.
    
 0.617
nck1
Cytoplasmic protein.
    
 0.617
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.