STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
p3h2Prolyl 3-hydroxylase 2. (680 aa)    
Predicted Functional Partners:
ENSOMEP00000020910
Prolyl 3-hydroxylase family member 4 (non-enzymatic).
   
0.806
P3H4
Prolyl 3-hydroxylase family member 4 (non-enzymatic).
   
0.806
crtap
Cartilage associated protein.
   
0.806
ppib
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.797
ppic
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.737
ticrr
Treslin_N domain-containing protein.
   
 0.627
LOC112137184
Protein disulfide-isomerase.
   
 0.626
p4hb
Protein disulfide-isomerase.
   
 0.626
ENSOMEP00000025294
Uncharacterized protein.
    
 0.617
ENSOMEP00000000937
VWFA domain-containing protein.
   
 0.574
Your Current Organism:
Oryzias melastigma
NCBI taxonomy Id: 30732
Other names: Aplocheilus melastigmus, Indian medaka, Java medaka, O. melastigma, marine medaka
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